BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F05LP1|AL429250
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig706 1134 0.0
3x_Contig1119 656 0.0
>3x_Contig706
Length = 2070
Score = 1134 bits (571), Expect = 0.0
Identities = 596/605 (98%), Gaps = 1/605 (0%)
Strand = Plus / Minus
Query: 298 catcgtcacgagcaactttattctttctttggtttaaagccgcagctagggcatcagcca 357
|||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 2070 catcgtcacgagcaacgttatccgt-ctttggtttaaagccgcagctagggcatcagcca 2012
Query: 358 aggacgcaggagcaccaacaggtccgccagttgacccgcctgtgggttgagataccggcg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 aggacgcaggagcaccaacaggtccgccagttgacccgcctgtgggttgagataccggcg 1952
Query: 418 catcactacgaacttcttgtaacaaaggacttggcttttcaagttgagatttatccacct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1951 catcactacgaacttcttgtaacaaaggacttggcttttcaagttgagatttatccacct 1892
Query: 478 tacggagggaattcagaccagctccacgaatcgatgctaataaggcatcccttccagcat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1891 tacggagggaattcagaccagctccacgaatcgatgctaataaggcatcccttccagcat 1832
Query: 538 caccagtattttcaacaaaaccagatcctgcttcaggttgattaaatgcaggggctggag 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1831 caccagtattttcaacaaaaccagatcctgcttcaggttgattaaatgcaggggctggag 1772
Query: 598 gaggaggaggaggtggtggtggtgcgggcgctgagttcgttatctgtggagcaaaaggtg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1771 gaggaggaggaggtggtggtggtgcgggcgctgagttcgttatctgtggagcaaaaggtg 1712
Query: 658 ccggaggggcaggaggtgctgggggaggtgcagtgccattaggtaccgctatatgatgct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1711 ccggaggggcaggaggtgctgggggaggtgcagtgccattaggtaccgctatatgatgct 1652
Query: 718 ggggttgggctaacataggctcggtcgatgggtgatactgagtkcttacacctgagttgg 777
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 1651 ggggttgggctaacataggctcggtcgatgggtgatactgagtgcttacacctgagtggg 1592
Query: 778 gtggtaagacagggggaggcggaatgtatgcsgtttgctgttgtggttgatattgctgaa 837
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1591 gtggtaagacagggggaggcggaatgtatgcggtttgctgtggtggttgatattgctgaa 1532
Query: 838 caggaggcgctgcattgtaggtattatgctgttgaagargaggagattgcatttgtggtg 897
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1531 caggaggcgctgcattgtaggtattatgctgttgaagaggaggagattgcatttgtggtg 1472
Query: 898 gaagc 902
|||||
Sbjct: 1471 gaagc 1467
>3x_Contig1119
Length = 5045
Score = 656 bits (330), Expect = 0.0
Identities = 333/334 (99%)
Strand = Plus / Plus
Query: 1 atccagaagtggaaacatcagttcttgctatcaataatgatgttaagaaagttataaaaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4712 atccagaagtggaaacatcagtacttgctatcaataatgatgttaagaaagttataaaaa 4771
Query: 61 ttattacacagctaaacggttcagatgagtccaagttgaaatggatacaggtatggtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4772 ttattacacagctaaacggttcagatgagtccaagttgaaatggatacaggtatggtcaa 4831
Query: 121 ataagtggagttctttgaataattagtttagttttatctgtcttctgttttaaaggcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4832 ataagtggagttctttgaataattagtttagttttatctgtcttctgttttaaaggcatc 4891
Query: 181 tgaaagtaatatataggtacaccgtacatacaaataccaaatcataattccacagtctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4892 tgaaagtaatatataggtacaccgtacatacaaataccaaatcataattccacagtctag 4951
Query: 241 tcagatgcagttcaagtagggtgaattactttcaccaatcatcaccgttgtctatatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4952 tcagatgcagttcaagtagggtgaattactttcaccaatcatcaccgttgtctatatcat 5011
Query: 301 cgtcacgagcaactttattctttctttggtttaa 334
||||||||||||||||||||||||||||||||||
Sbjct: 5012 cgtcacgagcaactttattctttctttggtttaa 5045
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5732
Number of Sequences: 1807
Number of extensions: 5732
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)